Blacksburg, Virginia

Virginia Tech

A b-glucosidase aggregating factor (BGAF) is a member of the small heat shock protein family (sHSP) --Blanchard, D, Esen, A In certain maize (Zea mays L.) genotypes b-glucosidase occurs as large insoluble or poorly soluble aggregates (Esen and Cokmus, 1990. Biochem Genet 28: pp 319-336). The b-glucosidase zymograms of such genotypes are devoid of enzyme bands after being stained for activity. These genotypes were originally thought to be homozygous for a null allele at the glu1 locus. However, biochemical data (Esen and Blanchard, 2000. Plant Physiology 122: Feb) from our laboratory clearly establishes that the monogenic inheritance reported for the null alleles at the b-glucosidase gene is actually for the BGAF protein. We also show that BGAF is solely responsible for b-glucosidase aggregation and insolubility, and thus, the apparent null phenotype. The objective of the present study was to clone and identify BGAF.

BGAF was extracted four times from 8 g of 3-d-old H95 etiolated shoots in 50 mM NaAc buffer, pH 5.0, containing 30 % ammonium sulfate (AS). The final pellet containing primarily free BGAF was solubilized in 50 mM NaAc buffer, pH 5.0 and immediately applied to a gel filtration column (Sephacryl HR 200, 90cm x 16mm). Fractions containing BGAF were identified by ELISA and pooled for hydrophobic interaction chromatography. BGAF was then applied to a ToyoPearl-butyl 650M hydrophobic interaction chromatography at 0.8 M AS in 50 mM NaAc buffer, pH 5. The column was washed with 0.8 M AS in NaAc buffer until baseline was reached. Stepwise elution was performed by reducing the ammonium sulfate concentration in 0.1 M increments. Fractions were screened for BGAF by ELISA, pooled, and concentrated 12-fold on a 10 K cut-off spin column (Gelman Sciences).

Purified BGAF (~250 pmoles) was submitted to Commonwealth Biotechnology for N-terminal sequencing. The N-terminal sequence was identified to be: [V, ?] [I, E] [G, P] [N, L] YAPIGIGATV. Therefore, the peptide APIGIGAT was used to design two degenerate primers; BGAF-6, CCNATHGGNATHGGNGCNAC; BGAF-7, CNCCNATHGGNATHGGNGC.

H95 seedlings were germinated in the dark for 2 days at 30 C in wet vermiculate. Whole shoots were harvested with a razor blade and used immediately for RNA isolation. mRNA was isolated using oligo dT coated magnetic beads. An Oligo dT primer (RT-3) was used for first strand cDNA synthesis with AMV-reverse transcriptase. To amplify the BGAF cDNA, BGAF-6 and BGAF-7 were individually paired with RT-3 in separate PCR reactions. The 1 kb PCR product generated was reamplified with pfu Turbo DNA polymerase, gel purified, and blunt-end cloned into pBluescript" II SK (+/-) for sequencing in both directions.

The sequence was used to perform a BLAST search in the maize EST database. The BLAST search exclusively identified heat-shock proteins, which matched with similarities ranging from 56% - 96%. The extreme 5' end of BGAF was obtained by overlapping the BGAF sequence with the highest match (96%) in the EST database. The identity of the 5' end sequence obtained by overlap was corroborated by reamplification of the H95 cDNA using a primer designed from the extreme 5' end of the EST sequence paired with a BGAF specific 3' end primer.

The identity of the putative BGAF cDNA was shown following its expression in E. coli. Western blots of E. coli expression extracts probed with BGAF antiserum showed an immunoreactive band whose electrophoretic mobility and molecular size were identical to BGAF isolated from plant extracts. Additionally, functional assays clearly showed the presence of BGAF in E. coli expression extracts, which tested positive for b-glucosidase binding activity in gel-shift assays.

BGAF has a 1143-bp long cDNA sequence, which includes a 918-bp coding sequence, and a 172-bp 3' untranslated region. The incomplete 5 untranslated region is 53-bp long.

The deduced protein has an open reading frame (the 918 bp coding region) encoding a 306- amino acid-long mature protein with a calculated molecular mass of 31.8 kD (Fig. 1). BGAF has a calculated isoelectric point of 6.00, consistent with the experimental isoelectric point.

Figure 1. Deduced primary structure of the BGAF cDNA. The open reading frame of BGAF encodes a 306-amino acid-long mature protein. The N-terminal protein sequence from which degenerate primers for RT-PCR were designed (arrow, gray box) is shown. The fact that the N-terminal sequence obtained is an internal polypeptide is likely due to an endogenous protease in maize.

Please Note: Notes submitted to the Maize Genetics Cooperation Newsletter may be cited only with consent of the authors.

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