Community IBM (cIBM2004) Maps.

 

Map score data for the community IBM maps  were supplied by various cooperators (Table 1) and is based on the IBM-94 panel of 94 stocks. These  ines are a subset of the high resolution IBM-302 mapping population used to anchor the physical map(Cone et 2002. Plant Physiol 130:1686-1696). The IBM recombinant inbreds were developed from the Syn 5 generation , following 4 inter-matings of B73xMo17 (Lee, M et al. 2002 Plant Mol Biol 48:453-461). Seed for the IBM-94 (Table 2) is distributed by the Maize Genetic Cooperation Stock Center <http://maizegdb.org/cgi-bin/stockcatalog.cgi?id=1>   . DNA samples of the IBM-94 and the parent lines, along with protocols, are distributed at the University of Missouri-Columbia  (<http://www.maizemap.org/dna_kits.htm>. Map score data submitted over the web <http://www.maizemap.org/CIMDE/cimde.html >  will return map results within a week after submission; loci  are placed based on a framework of 250 loci  also mapped on the high resolution IBM maps. Each new marker is assigned to chromosome and mapped on the individual chromosomes using the build and place commands of Mapmaker.

 

With permission of individual cooperators, the community map will be published annually to MaizeGDB. Loci submitted to MaizeGDB are vetted, in consultation with the contributors,  for nomenclature, and probe details , including relationships of probes to physical map probes. The first  community map was provided to MaizeGDB Dec 2003 and is called cIBM2003. Information about associations to the physical map are additionally provided to Cari Soderlund, via the IBM neighbors (Polacco, M et al 2004 Plant and Animal Genomes XII Conference,  Maize Workshop < http://63.141.253.172/12/abstracts/W34_PAG12_159.html> for inclusion in the maize FPC product < http://www.genome.arizona.edu/fpc/maize/>  and to the Maize Mapping Project  iMap representation  <http://www.maizemap.org/imap.htm>.

 

 

Table 1 Cooperators providing raw map data include:

Ivan Acosta, Yale University, New Haven, CT: hlm2, tip1

Hank Bass, University of Georgia, Athens, GA: fsu1b(smh2), smh1.

Tom Brutnell, Cornell University, Ithaca, NY(<http://bti.cornell.edu/Brutnell_lab2/Projects/Tagging/BMGG_pro_tagging.html> : bti00191a::Ac, bti00191b::Ac, bti03525::Ac, bti03526::Ac, bti03545::Ac, bti03557::Ac, bti03616::Ac, bti03702::Ac, bti03811::Ac, bti31132a::Ac, bti31132b::Ac, bti31192::Ac, bti99224::Ac, btilc175::Ac, mon00004::Ac, mon00030::Ac, mon00038::Ac, mon00044::Ac, mon00060::Ac, mon00072::Ac, mon00084::Ac, mon00088::Ac, mon00092::Ac, mon00106::Ac, mon00108::Ac, mon00122::Ac, mon00128::Ac, mon00150::Ac, mon00152::Ac, mon00178::Ac, mon00186::Ac, mon00192::Ac, mon00200::Ac, mon00218::Ac, mon00236::Ac, mon03068::Ac, mon03077::Ac, mon03078::Ac, mon03080::Ac.

ChromDB <http://www.chromdb.org>  , University of Arizona, Tucson, AZ  ). Chromatin RFLP: ago108, bnlg182, brd101, brd102, brd103, chb101a, chb101b, chb102, chc101a, chc101b, chr106a, chr106b, chr109a, chr109b, chr110a, chr110b, chr111, chr112a, chr112b, chr113, chr116a, chr116b, chr117a, chr117b, chr117c, chr117d, chr118, chr118, chr119, chr120, chr122, chr124, chr125a, chr125b, chr126a, chr126b, crd101, dmt101, dmt102a, dmt102b, dmt103a, dmt103b, dmt103c, epl101, fie2, gta105, gta106b, gta107a, gta107b, gtb101, gtc101, gtc102, gtd101, gte101, gte102, hac101a, hac101b, haf101, hag101, hag102, hag103a, hag103b, hag105, hda102, hda108, hda109, hda110, hdt102, hdt103, hdt105, hmga101, hon104a, hon104b, hon105, hon106a, hon106b, hon107a, hon107b, hon110, hxa102a, hxa102b, mbd101a, mbd101b, mbd105, mbd106, mbd108, mbd109, mbd116, mbd119, mbd121, mez1, nfa101, nfa102a, nfa102b, nfa104, nfc101, nfc103a, nfc103b, nfc104a, nfc104b, nfc104c, nfc105, nfd101a, nfd101b, nfd102, nfd104a, nfd104c, nfd104d, nfd104e, nfd105, nfd106, nfd107, nfd108, nfd109, nfd110, nfd114, nfe101, sdg101, sdg102a, sdg102b, sdg102c, sdg104, sdg105a, sdg106, sdg107, sdg108a, sdg108b, sdg110, sdg111a, sdg113, sdg115, sdg116a, sdg116b, sdg117a, sdg117b, sdg118, sdg119, sdg123, sdg129, sgb101, sgb103, sgf101, smh4, vef101a, vef101b.

Genoplante, France ( <http://genoplante-info.infobiogen.fr>.  RFLP related to Overgos on the physical map: gpm1, gpm10, gpm11, gpm12, gpm13, gpm14, gpm15, gpm16, gpm2, gpm3, gpm4, gpm5, gpm6, gpm7, gpm8, gpm9

Peter Rogowsky, EDP ENS-Lyon, Lyon France: ensl015, ensl016.

Mike McMullen, USDA-ARS Columbia, MO. SNPs related to Overgos on the Physical map: AI714808, AI737325, AI861369, AW036917, AW172071, AW231791, AW258116, AY103622, AY103942, AY103944, AY104188, AY104234, AY104686, AY105043, AY105132, AY105205, AY105451, AY105479, AY105872, AY106026, AY106137, AY106170, AY106313, AY106318, AY106439, AY106518, AY106592, AY106674, AY106825, AY107012, AY107018, AY107034, AY107053, AY107079, AY107121, AY107128, AY107193, AY107200, AY107292, AY107329, AY107414, AY107489, AY107496, AY107517, AY107629, AY107682, AY107743, AY107844, AY107881, AY107910, AY107911, AY108545, AY108825, AY108844, AY109061, AY109096, AY109128, AY109538, AY109804, AY110113, AY110240, AY110782, AY110827, AY110835, AY110853, AY111089, AY111254, AY111333, AY111822, AY111877, AY111962, AY112119, AY112175, AY112199, AY112283, AY112355, BE518809, BG266188

Sahtoh Namiko, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY: shpl1.

Wolfgang Werr, Roman Zimmerman  Institut fr Entwicklungsbiologie,Universtaat Kln, Kln Germany: nact11, nact12, nact15, nact16a, ns1

 

 

Table 2. The IBM-94 panel includes the below lines:

MO001 MO005 MO007 MO008 MO010 MO012 MO014 MO015 MO016 MO017 MO021 MO022 MO023 MO024 MO025 MO027 MO028 MO029 MO030 MO031 MO032 MO033 MO034 MO035 MO039 MO040 MO043 MO044 MO045 MO046 MO048 MO051 MO052 MO054 MO055 MO057 MO058 MO060 MO061 MO062 MO063 NO066 MO067 MO074 MO075 MO076 MO077 MO079 MO262 MO264 MO265 MO266 MO267 MO269 MO272 MO275 MO276 MO281 MO284 MO287 MO288 MO296 MO297 MO298 MO309 MO310 MO311 MO315 MO317 MO321 MO322 MO323 MO325 MO326 MO328 MO337 MO341 MO344 MO345 MO346 MO352 MO354 MO355 MO357 MO360 MO364 MO365 MO368 MO369 MO378 MO379 MO382 MO383 MO384 

These line numbers are identical to the corresponding line in the larger panel of stocks, IBM 302, where seed are also maintained at the Stock Center.

 

Acknowledgements. This report would not have been possible without the  considerable contribution s of Karen Cone, Mike McMullen, Georgia Davis , Seth Haverman and Hector Sanchez-Villeda  towards the design and implementation of the CIMDE (Community IBM map data entry) software package  (Sanchez-Villeda et al 2003 Bioinformatics 19:2022-2030) and the encouragement of Ed Coe, PI of the Maize Mapping Project, NSF DBI 9872655 that funded the software resources used for  these maps.

 

Maps Legend.

 

Bin edges are indicated to left of each chromosome; asteriks  indicate  a core marker. Positions of off-frame loci are indicated as an interval value, in parentheses, and refer to the interval down f rom the framework locus to their immediate left. Note, due to the inter-matings in this population, these are not true centiMorgan (cM) units defined in the classical sense.

 

 

Submitted by

Mary Polacco

USDA-ARS

 University of Missouri


 


 

 

 

cIBM2004 CHROMOSOME1

 

 

 

 

 

BIN

Position

Locus

Locus Off Frame

1.00

0

umc157

 

 

43.7

umc1354

 

1.01

46

tub1

 

 

50.6

dmt103b

 

 

54.2

umc1566

(17.4)mon03077::Ac

 

87.9

lim179

(7.7)AY107629

 

111.8

umc1977

 

1.02*

123.4

AY110853

 

 

146.7

csu1171

 

 

175.2

bnlg1953

(2.3)mon03080::Ac

 

221.2

mon00192::Ac, mon00106::Ac

 

1.03

221.3

um76a

 

 

226.5

umc1403

 

 

274.7

AY106592

 

 

283.6

asg35b

 

 

294.6

AY110240

 

 

297.7

AY107489

(4.8)bnlg182

 

303.1

umc1598

 

 

315.1

mmp100

 

1.04*

336.3

umc1169

(0.6)chr125b

 

350.8

bnl9.11b

(3.1)AY103942

1.05

365.2

csu3

(5.5)btilc175::Ac

 

379.6

umc1515

 

 

382.7

nfd104c

 

 

386.7

AY106439

 

 

387.8

AY107682

 

 

399.3

hac101b

 

1.06*

408

mbd106

 

 

410.4

umc1972

(1.1)gmp4

 

426.1

mbd119

 

 

432.9

asg58

 

 

444.7

nact15

 

 

467.8

ntf1

 

 

489.1

umc1925, asg62

(56.1)mon00186::Ac

1.07

489.7

asg62

 

 

551

bnlg1556

 

 

560.9

dmt103c

 

 

578.5

hon105

(8.7)bti03557::Ac

 

588

bnlg1025

 

1.08

601.7

umc128

(0.6)AY105132

 

608.8

bnlg2228

 

 

611.3

chr124

 

 

614.9

bti03545::Ac

 

 

618

sdg123

 

 

627.1

umc1991

 

 

646.8

nfc103a

 

1.09

651.7

cdj2

(3.7)AY106137

 

666.4

umc2047

 

 

680.3

AY112283

 

1.10

685

umc107a

 

 

691.4

chb101b, chr106a

 

 

691.5

nfa103a

 

 

696.8

AY104234

 

 

701.2

hxa102b

 

 

703.1

vef101b

 

1.11*

712.2

lim39

(21.7)mon00200::Ac

 

737.3

umc1421

(2.7)hon110

 

754.8

AY109096

 

 

767.6

AY106825, umc1630

 

 

771.2

AY112175

 

 

782.1

AY109128

 

 

812.9

phi064

 

1.12

831.3

bnl6.32

 

 

833.2

umc1605

 

 

842.3

AY104686

 

 

 

 

cIBM2004 CHROMOSOME 2

 

 

 

 

 

BIN

Position

Locus

Locus Off Frame

2.00

0

isu53a

 

2.01*

22

umc1165, bti00191a::Ac

(42.1)sgb101

2.02*

64.7

umc1824a

 

 

78.4

dmt102b

 

 

84.2

eks1

(22.0)gmp7

2.03

110.1

umc6a

 

 

128.3

nfd102

 

 

139.4

mmp33

 

 

152.2

sdg104

 

 

157.1

AY107034

 

 

159.8

sdg107

 

2.04*

161.3

phi109642

 

 

169.2

AY103944

 

 

172

umc1326

 

 

174.3

hag103a

 

 

192.1

AI714808

(4.9)bti03811

 

197.4

umc2030

(1.0)sdg102a

 

200

hda102

(0.9)AY112119

2.05

206.1

umc131

 

 

207.4

zpu1

(0.4)AY107012

 

212.6

ns1

 

 

214.6

AY111877

 

2.06*

217.3

pbf1

 

 

226.9

umc1080

(0.5)sdg119

2.07*

238.9

umc2129

(3.1)AI861369

 

244

umc1890

 

 

255.7

nfc104b

 

 

259.4

sdg106, nfd101b

(11.7)chr119,(9.7)sdg116b

 

271.8

umc1560

 

2.08

274.7

asg20

 

 

286.8

mon00084::Ac

 

 

296.4

hda109, chr122

 

 

303.1

umc1604

 

 

308

hag105

 

 

312.4

chc101b

 

 

326

mmc0381

 

 

336.2

gmp16

 

2.09

346

umc49a

 

 

355.3

umc1252

 

 

380.9

BG266188

 

 

401.4

bnlg469b

 

2.10*

437.1

AY106674

 

 

446.7

lim104

(0.9)chr106b

 

452.4

umc1696

 

 

 

 

cIBM2004 CHROMOSOME 3

 

 

 

 

 

 

 

BIN

Position

Locus

Locus Off Frame

 

3.01*

0

umc1931

 

 

 

4.4

bnl8.15

()AY106313

 

 

17.9

AY112199

 

 

 

20.5

umc2049

 

 

3.02

40.1

csu32a

 

 

 

58.7

umc1886

 

 

3.03

86.1

asg24a

 

 

 

104.7

lim66

 

 

3.04

124.5

asg48

 

 

 

137.4

umc1608

 

 

 

147.7

nfc104c

(2.3)haf101,(12.6)AY107193

 

 

160.9

mmc0132

(3.8)chr126b, (3.4)bti03702::Ac

 

 

169.7

umc1449

(4.8)mbd105,(4.6)chr110a,(4.5)AY111333

 

 

176.3

hac101a

 

 

 

179.9

AY110827, gmp14

 

 

3.05

184.4

umc102

(7.6)bti03526::Ac

 

 

190.7

chr109b, umc1102

(35.1)mon00178::Ac,(0.5)nact16a

 

 

227.9

csu636

 

 

3.06*

236.5

umc1539

 

 

 

249.9

asg39

 

 

 

251.9

AY106026

 

 

 

309.4

csu1183

 

 

 

314.4

sdg113

 

 

 

320.4

bti31083::Ac

 

 

 

330.9

asg7b

 

 

3.07

333.2

bnl6.16a

 

 

 

348.2

AY107018

 

 

 

369.4

umc1404

 

 

 

377

sdg117a

 

 

 

378.8

nfc101, nfc105

 

 

 

380.6

hon108

 

 

 

382.3

AY106518

 

 

3.08

387.2

umc17a

 

 

 

389

AW258116

 

 

 

403.5

gmp3

 

 

 

408.7

mmc0251

(12.7)sdg115

 

 

424

umc1273

 

 

3.09

428.6

umc63a

 

 

 

436.7

csu845

(13.5)AY111254

 

 

476.5

lim182

 

 

 

491.1

bnlg1754, fsu1b

 

 

 

527.2

umc1641

 

 

 

532.4

bti03616::Ac

 

 

 

538.3

umc1594

 

 


 

 

 

 

 

 

 

 

cIBM2004 CHROMOSOME 4

 

 

 

 

 

 

 

BIN

Position

Locus

Locus Off Frame

 

4.01*

0

msf1

 

 

 

20.8

bx4

 

 

 

43.1

umc1759

 

 

4.02

45.6

php20725a

 

 

 

67.4

umc1943

 

 

4.03

104.8

umc31a

(1.5)chr117c

 

 

116.6

umc1926

 

 

 

147.6

umc2039

 

 

 

212.5

bnl8.45c

 

 

4.04*

280

bnlg490

 

 

4.05*

286.1

sdg108a

 

 

 

292.1

AY107128

 

 

 

301.5

csu509

 

 

 

307.9

chr112a, hda108

 

 

 

310.8

umc1511

 

 

 

313.1

nfa104

 

 

 

314.8

nfd104e

(0.5)AY105043

 

4.06*

321

umc1945

 

 

 

335.7

nfd105

 

 

 

344

mpik3

 

 

4.07

371.4

bti31094::Ac, umc66a

 

 

 

377.2

umc2038

 

 

 

380.4

mon00128::Ac

 

 

 

382.9

mon03078::Ac

 

 

 

387.1

bnl5.24b

 

 

 

397.4

bti00207::Ac

 

 

4.08*

398.7

umc1775

 

 

 

409.4

umc1808

 

 

 

448.9

ufg23

(13.7)nfd106, (12.8)bti00245::Ac

 

 

463.1

umc1842

(1.0)mbd121, (1.9)mon00150::Ac

 

4.09

468.2

umc52

(6.5)AY111962

 

 

475.9

umc1999

(2.1)nfd107

 

 

492.4

AY107200

(7.4)chb102

 

 

501.4

mbd116

(14.5)bti31192::Ac

 

 

517.6

sbp2

(4.4)AY107910

 

4.10

530.4

php20608a

 

 

 

547.8

umc1109

(15.2)AY111822

 

 

563.6

hon106b

 

 

 

574.2

bip2

 

 

 

577.9

umc1707

 

 


 

 

 

 

 

 

 

cIBM2004 CHROMOSOME 5

 

 

 

 

 

BIN

Position

Locus

Locus Off Frame

5.00

0

umc1253

 

 

21.4

tip1, umc1260

 

5.01

23.2

npi409

 

 

31.5

lim407

 

 

61.2

umc2036

(4.0)hxa102a

5.02*

85.9

asg73

 

 

90.5

chb101a

 

 

94

umc1587

(23.4)ago108,(23.3)AY110835

5.03*

119

bnlg1879

 

 

133

rz474a

(1.2)mbd109

 

138.3

nfc103b

 

 

150

umc2035

 

 

158.8

hag101

 

 

165.7

crd101

 

 

168.8

gmp5

 

 

173

umc1609

 

 

178.3

AY107414

 

 

182.2

shpl1

 

 

187.1

sdg129, AY107844

 

 

187.2

gtc101, gtc102

 

 

188.3

hon106a

 

 

190.7

bnlg1902

 

5.04*

199.3

mon00030::Ac

(2.8)nfd108

 

203.7

umc1990

 

 

218.4

AY105205

 

 

225.7

umc1349

 

 

233.3

mon00152::Ac

 

5.05*

242.3

umc1482

 

 

252.7

nfe101

(15.0)AY107329,(13.5)AY111089

 

269.7

nbp35

(0.6)gte102

 

281.8

mon00044::Ac

 

5.06

290

umc126a

 

 

299.7

nfd104a

 

 

316

bnlg609

 

 

326.7

sdg117b

 

5.07

347.1

umc108

 

 

397.9

bnlg1118

 

 

412.3

bnlg118

 

5.08*

443.5

umc1225

 

 

445.2

mmp175

 

 

454.4

nfd109

 

5.09

463.3

php10017

 


 

 

 

 

 

 

 

 

cIBM2004 CHROMOSOME 6

 

 

 

 

 

 

 

BIN

Position

Locus

Locus Off Frame

 

6.00

0

umc1143

 

 

6.01

19.9

hon104b, umc85a

sdg102b

 

 

27.1

bnlg1867

(1.5)gmp8

 

 

31.1

nfa101

(0.6)mez1,(0.5)mon00038::Ac

 

 

32.3

AY107121

 

 

6.02*

36.1

umc1006

 

 

 

40.7

sdg102c

 

 

 

49.5

csu923

 

 

6.04

61

umc65a

 

 

 

75.6

umc1857

(1.5)nact11,(1.2)AY108825,(1.8)AY109804

 

 

78.5

sgf101

 

 

 

85.6

gta107b, gta105

 

 

 

90.5

bti31132a::Ac, bti31132b::Ac

 

 

 

103.3

umc2006

(7.8)AY107053

 

6.05*

111.7

isu111a

 

 

 

114.8

AY105479

(0.7)AY107517

 

 

116.9

chr117d

 

 

 

121.4

uaz280c

 

 

 

130.6

umc1388

 

 

 

143.6

pmg1

(1.5)mbd101b

 

 

152.4

chr116a, AY107881

 

 

 

169.6

AW036917

 

 

 

192.5

uaz121a

 

 

 

199.4

gmp9

 

 

6.06

213.3

umc38a

 

 

 

216.3

umc1762

 

 

 

218

sdg111a, gtb101

 

 

 

231.3

lim379

 

 

 

236.6

lim151

(0.9)gte101

 

6.07

257

umc132a

(0.7)hdt103

 

 

260.2

nfa102a

 

 

 

265.5

mlg3

 

 

 

309.1

umc1350

(35.3)chr118,(35.3)chr121

 

6.08*

346.2

umc2059

 

 

 

 

 

 

 


 

 

 

cIBM2004 CHROMOSOME 7

 

 

 

 

 

BIN

Position

Locus

Locus Off Frame

7.00

0

csu582

 

 

42.8

umc1378

(1.2)gmp12

 

63.9

umc1672

 

7.01

80.8

asg8

 

 

91.8

php20581a

 

 

102.8

hda110

 

 

122

dmt101

 

 

123.7

o2, hon102

 

7.02

124.3

asg34a

 

 

142.5

sdg101

 

 

150.4

cyp6

(0.6)AY109061

 

150.9

AY106170

 

 

152

epl101, vef101a

 

 

153.1

hag102, sdg110

 

 

169.2

umc1983

 

 

185.5

mon03068::Ac

 

 

194.6

bnlg1808

 

7.03*

196.9

mmp127

 

 

233

bnlg1070

 

 

241.8

mbd108

 

 

243

brd103

(1.6)bti31211::Ac

 

245.4

sdg116a

 

 

247.7

mon00072::Ac

 

 

254.9

umc56

 

 

261.3

brd101, nfd101a

(3.2)AY107911

 

279.8

tif1

 

7.04*

290.2

umc1710

 

 

313.2

bnlg1666

 

 

320.8

chr111

 

 

342.9

mon00088::Ac

 

 

345.7

umc1708

 

 

355.6

AY108844

 

 

368.5

mon00060::Ac

 

 

381

umc1412

 

 

389

gmp2

 

7.05

395.9

umc245

(7.0)chc101a

 

405.4

phi069

(6.0)AY106318

 

449.3

umc1406

 

7.06

455.3

umc168

 

 

459.7

nfc104a

 

 

 

 

 


 

 

 

cIBM2004 CHROMOSOME 8

 

 

 

 

 

BIN

Position

Locus

Locus Off Frame

8.01

0

npi220a

 

 

9.3

csu319

 

 

35

umc1592

 

 

57.9

umc1327

 

 

76.4

mmp85

 

8.02*

82

hon107b

 

 

83.9

gmp11

 

 

86.6

cdo460

 

 

107.3

mmp166

 

 

111.1

chr117a

 

 

126.8

AI737325

 

 

143.8

nfd110, nfd114

 

 

143.9

umc124a

 

 

145.6

umc1530

 

 

166.5

gmp10, AY110113

 

8.03

166.6

chr110b, chr126a

 

 

169.4

bti03525::Ac

 

 

174.5

umc1910

 

 

180.4

AW172071

 

 

197.9

umc1457

 

 

201.7

AY108545, mbd101a

 

8.04*

204.1

AW231791, AY107079

 

 

213.8

sdg105a

 

8.05*

216.1

umc1130

 

 

229.6

chr117b

(6.1)nfa102b

 

237.5

umc1889

(0.6)hdt102

 

242.2

chr112b

 

 

242.8

hon107a

 

 

243.4

fsu1a

 

8.06*

264.4

sdg118, umc1149

 

 

287.2

hdt105

 

 

294.4

chr116b

 

 

300.1

bnlg1031

(18.8)mon00108::Ac

8.07*

328.3

umc1268

 

8.08

335.2

npi414a

 

 

364.8

umc1933

(20.2)mon00122::Ac

8.09

395.1

agrr21

 

 

469.4

bnlg1131

 

 

 

 

 


 

 

 

cIBM2004 CHROMOSOME 9

 

 

 

 

 

BIN

Position

Locus

Locus Off Frame

9.01

0

umc109

(9.6)AY112355

 

47.4

lim343

 

 

50.6

ufg41

 

 

54.8

gta106b, gta107a

 

 

69.5

umc1967

 

 

71.2

AY107496

 

9.02

73.5

bz1

 

 

90.6

chr113

 

 

93.5

csu471

 

 

99

AY103622

 

 

118.4

bnlg1401

 

 

149.5

AY105451

 

9.03

159

wx1

 

 

160.9

mon00236

 

 

162.8

umc1258

(1.1)hon104a

 

167.9

gmp6

 

 

174

chr120

 

 

175.3

nact12

(5.7)gtd101,(5.7)ensl015,(5.7)ensl016,(5.8)AY107743,(5.7)BE518809

 

181.9

umc1271

 

 

189.9

rz682

 

9.04*

196.6

bnlg1209

 

 

208.2

AY110782

 

 

209.4

umc1120

 

9.05

215.7

umc95

 

 

218.6

chr125a

 

 

225.7

mmp151d

 

 

248.2

csu634

 

 

253.7

ufg24

 

9.06*

269

gmp1, mmp142

 

 

293.5

AY107292

 

 

305.8

mmp131

(4.9)AY104188

 

313.7

mmp168

(3.4)nfd104d,(19.2)mon00004

9.07

333.5

asg12

 

 

346.3

bnlg619

 

 

359

brd102, mon00092

 

 

378.5

umc1137

(25.8)dmt103a

 

408.6

umc1505

 

 

 

 

 


 

 

 

cIBM2004 CHROMOSOME 10

 

 

 

 

 

BIN

Position

Locus

Locus Off Frame

10.00

0

mmp48a

 

 

10

php20753a

 

10.01

14

php20075a

 

 

39.5

umc2018

(2.1)bti99224::Ac

10.02

48.5

npi285a

 

 

76.1

umc2069

 

10.03

80.8

umc130

(8.9)chr109a,(4.5)AY105872

 

90.2

sdg108b

 

 

92.9

umc1345

 

 

97.7

hlm2

 

 

100.8

gmp13, fie2

 

10.04

102.5

umc64a

 

 

108.1

umc1995

 

 

116.1

AY109538

 

 

125.6

umc1330

 

 

131.6

hag103b

 

10.05

136.3

umc259a

 

 

148

umc1506

(28.1)gmp15

10.06*

177.3

bnl10.13a

 

 

187.9

bnl17.02

 

 

219.4

umc1993

(5.6)dmt102a

10.07

245.2

bnl7.49a

 

 

255

bnlg1677

(0.4)sgb103

 

311.2

bnlg1450

(33.7)mon00218::Ac

 

315.8

bti00191b::Ac

(0.4)sgb103

 

341.1

asg19b

(33.7)mon00218::Ac