MNL GENELIST -- partial; P-R

MaizeDB
Maize Genetics Cooperation Newsletter
GENELIST -- index

p1 , bin(s) 1.03 , pericarp color1 , dominant P1 regulates red pigment (phlobaphenes) in cob and pericarp (ex. P1-wr red cob; P1-rr red pericarp and cob); tissue-specific allele variations; SSR phi095
ref: 209, 445
.

pal1 , bin(s) 5.05 , phenylalanine ammonia lyase1 , leaf cDNA csu156 similar to rice phenylalanine ammonia lyase, single copy
ref: 377
.

pam1 , plural abnormalities of meiosis1 , desynchronized meiotic divisions and premeiotic mitosis; male sterile, incompletely female sterile
ref: 270
.

pam2 , plural abnormalities of meiosis2 , like pam1
ref: 267
.

pat , phosphinothricin acetyl transferase , synthetic gene sequence derived from the Streptomyces viridochromogenes gene; Mendelian segregation of transformants
ref: 595
.

pb4 , bin(s) 6.02 , piebald leaves4 , like pb1
ref: 177
.

pbp1 , promoter binding protein1 , cDNA clones, Southwestern analysis supports binding to pep1 promoter, light induced
ref: 375
.

pck1 , phosphoenolpyruvate carboxykinase homolog1 , leaf cDNA csu145, low copy, similar to yeast phosphoenolpyruvate carboxykinase
ref: 38
.

pcna1 , proliferating cell nuclear antigen1 , full-length cDNA; predicted protein shows high similarity to rice, human, others
ref: 450
.

pcr1 , protochlorophyllide reductase1 , leaf cDNA csu349 similar to plant protochlorophyllide reductase
ref: 40
.

pdc1 , bin(s) 8.04 , pyruvate decarboxylase1 , cDNA and genomic clone
ref: 379, 615
.

pdc2 , bin(s) 8.02 , pyruvate decarboxylase2 , cDNA available; gene-specific probe
ref: 615
.

pdc3 , bin(s) 1.03 , pyruvate decarboxylase3 , cDNA sequence, gene-specific probe
ref: 615
.

pdf1 , thylakoid membrane polypeptide1 , dominant Pdf1 confers increase in electrophoretic mobility
ref: 523
.

pdi1 , protein disulfide isomerase homolog , endosperm cDNA 5C05G07 similar to protein disulfide isomerase
ref: 310
.

pdk1 , bin(s) 6.05 , pyruvate, orthophosphate dikinase1 , cDNA, genomic and peptide sequences; microsatellite mapped (SSRs phi025, phi078, phi081; nc012 ); cytosolic or plastidic, dependent on transcript processing
ref: 264, 728
.

pdk2 , bin(s) 8.04 , pyruvate, orthophosphate dikinase2 , cytosolic .

pe1 , perennialism1 , vegetatively totipotent in combinations with gt1 and id1
ref: 733, 734
.

pep1 , bin(s) 9.03 , phosphoenolpyruvate carboxylase1 , cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
ref: 332, 340
.

pep4 , bin(s) 7.02 , phosphoenolpyruvate carboxylase4 , cDNA for anaplerotic C3 isozyme; gene specific cDNA probe;
ref: 376
.

pet1 , bin(s) 8.04 - 8.09 , photosynthetic electron transport1 , high leaf chlorophyll fluorescence, pale green, lacks cytochrome bf, reduced PSII at higher intensity light (aka hcf121)
ref: 31
.

pet2 , photosynthetic electron transport2 , lacks cytochrome bf polypeptides
ref: 31
.

pet3 , photosynthetic electron transport3 , lacks cytochrome bf polypeptides; likely allelic to hcf6
ref: 31
.

pet4 , photosynthetic electron transport4 , lacks cytochrome bf polypeptides
ref: 31
.

pet5 , photosynthetic electron transport5 , lacks cytochrome bf polypeptides
ref: 31
.

pex1 , pollen extensin-like1 , clone specifies repeat motif ser-pro4
ref: 686
.

pex2 , pollen, extensin-like2 , clone like pex1
ref: 686
.

pfk1 , phosphofructose kinase1 , vegetative meristem cDNA 7C02A06
ref: 311
.

pg2 , bin(s) 3.04 , pale green2 , seedling pale green, classification difficult; plants weak
ref: 175
.

pg11 , bin(s) 6.02 , pale green11 , duplicate factor with pg12; seedling light yellowish green; mature plant pale and vigorous
ref: 661
.

pg12 , bin(s) 9.03 , pale green12 , duplicate factor with pg11
ref: 661
.

pg13 , pale green13 , seedling light yellowish green; stunted growth
ref: 55, 744
.

pg15 , bin(s) 1.00 - 1.05 , pale green15 , seedling light yellowish green; bleaches to near white in patches; lethal
ref: 548
.

pg16 , bin(s) 1.06 - 1.12 , pale green16 , seedling light yellowish green
ref: 548
.

pgd1 , bin(s) 6.01 , 6-phosphogluconate dehydrogenase1 , electrophoretic mobility, null alleles occur; cytosolic; dimeric, intra/interlocus hybrid bands occur; cDNA csu262 single copy
ref: 40, 279
.

pgd2 , bin(s) 3.05 , 6-phosphogluconate dehydrogenase2 , electrophoretic mobility, null allele is known; cytosolic; dimeric; intra/interlocus hybrid bands occur; cDNA probe
ref: 279
.

pgl1 , exopolygalacturonase1 , cDNA clone nearly identical but distinct from other pgl reading frames of inbred Mo17, sequence match to N-terminal sequence of maize exopolygalacturonase
ref: 29, 587
.

pgl2 , polygalacturonase2 , cDNA and genomic clones, sequence nearly identical to pgl1; one of 10-12 member gene family
ref: 29, 587
.

pgl3 , polygalacturonase3 , cDNA and genomic clones; one of 10-12 member gene family
ref: 29, 587
.

pgl4 , exopolygalacturonase4 , cDNA sequence; distinct from others isolated from same inbred; one of 10-12 member gene family
ref: 587
.

pgl6 , exopolygalacturonase6 , genomic sequence homologous to pollen-specific cDNA, significant homology to tomato-ripening enzyme; one of 10-12 member gene family; promoter active in transgenic tobacco
ref: 10
.

pgl7 , exopolygalacturonase7 , genomic clone, open reading framese nearly identical to pgl1 but distinct 3' non-coding sequence
ref: 29
.

pgl8 , exopolygalacturonase8 , genomic clone, open reading frame nearly identical to pgl1 but distinct 3' non-coding sequence; mRNA product confirmed by PCR
ref: 29
.

pgm1 , bin(s) 1.09 , phosphoglucomutase1 , electrophoretic mobility; null allele is known; cytosolic; monomeric
ref: 279
.

pgm2 , bin(s) 5.02 , phosphoglucomutase2 , electrophoretic mobility; null allele is known; cytosolic; monomeric
ref: 279
.

ph1 , bin(s) 4.01 , pith abscission1 , cob disarticulation; quantitative, one of a family of loci differentiating maize vs. teosinte
ref: 253
.

phi1 , bin(s) 1.11 , phosphohexose isomerase1 , electrophoretic mobility; null allele is known; cytosolic; dimeric; intralocus hybrid bands occur; cDNA clone pGPI1a (Lal & Sachs, 1995)
ref: 279
.

pho1 , phosphate regulatory homolog1 , endosperm cDNA 5C04B08, similar to yeast pho80 gene
ref: 310
.

php1 , bin(s) 10.03 , chloroplast phosphoprotein1 , isozyme; phosphorylated thylakoid protein. Chloroplast phosphoprotein polymorphic in COxTx
ref: 108
.

phy1 , phytochrome1 , sequence
ref: 137
.

pi1 , pistillate florets1 , duplicate factor with pi2; secondary florets develop ("Country Gentlemen" or "Shoe Peg" expression) in pi1 pi2 ears; quantitative character
ref: 333
.

pi2 , pistillate florets2 , duplicate factor with pi1
ref: 333
.

pki1 , protein kinase inhibitor1 , endosperm cDNA sequence, contains conserved Zn++ binding motif of yeast protein kinase C inhibitor
ref: 750
.

pks1 , polyketide synthesis homolog1 , vegetative meristem cDNA 7C02F01 similar to an acyl CoA condensing enzyme
ref: 311
.

pl1 , bin(s) 6.04 , purple plant1 , Pl1 plant tissues have light-independent pigment, pl1 blue light-dependent; Pl1-Bh1, colored patches in c1 aleurone and in plant; transcriptional activator for flavonoid genes; SSR phi031, nc009, nc010
ref: 215, 216
.

pld1 , phospholipase D1 , cDNA clone, amino acid sequence 90% similar to rice PLD
ref: 828
.

ploc1 , plastocyanin homolog1 , leaf cDNA csu257, similar to plastocyanin
ref: 40
.

pls1 , phospholipid synthesis1 , endosperm cDNA complements E. coli temperature sensitive mutant in plsC
ref: 88
.

plt1 , phospholipid transfer protein homolog1 , amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
ref: 817
.

pm1 , bin(s) 3.05 , pale midrib1 , midrib and adjacent tissue lighter green; reduced plant vigor
ref: 84
.

pmg1 , phosphoglycerate mutase1 , cDNA sequence corresponds to sequence of purified protein; genomic sequence; amino acid sequence similar to alkaline phosphatases (yeast, E. coli, human)
ref: 284
.

pn1 , bin(s) 7.06 , papyrescent glumes1 , dominant Pn1 plants have long, thin papery glumes in ear and, less obviously, in tassel
ref: 249
.

po1 , bin(s) 6.01 , polymitotic1 , (aka ms4, ms6) repeats 2nd meiotic division in male and female
ref: 44, 45
.

pop1 , bin(s) 1.04 - 1.05 , putative organelle permease1 , endosperm cDNA 5C02F05 (uaz 282)single copy, similar to yeast putative mitochondrial carrier protein
ref: 309
.

pox1 , fowlpox viral protein homolog1 , endosperm cDNA 5C04H07, similar to virus major core protein
ref: 310
.

ppg1 , bin(s) 5.05 - 5.09 , pale pale green1 , light pale green seedling with white crossbands that become necrotic, spreading to the rest of the leaf causing lethality
ref: 548
.

ppi1 , peptidyl-prolyl isomerase1 , cDNA homologous to tomato peptidyl-prolyl cis-trans isomerase
ref: 255
.

ppo1 , polyphenol oxidase1 , vegetative meristem cDNA 7C02D02
ref: 311
.

ppp1 , bin(s) 5.07 , pyrophosphate-energized proton pump1 , endosperm and leaf cDNA's 5C02E08 (uaz280),csu220; single copy; similar to plant vacuolar pyrophosphate-energized ATPase
ref: 40, 309
.

pr1 , bin(s) 5.05 , red aleurone1 , changes purple aleurone to red; encodes flavonoid 3'-hydroxylase
ref: 201
.

prc1 , bin(s) 9.02 , proteasome C9 homolog1 , endosperm cDNA 5C02A05 (uaz237), similar to proteasome subunit
ref: 309
.

prc2 , proteasome component2 , vegetative meristem cDNA 7C02B10
ref: 311
.

pre1 , premature senescence1 , senescence begins at least 2 weeks prior to anthesis, spreading from bottom to top of plant; occasionally sheds viable pollen
ref: 78
.

prem1 , pollen retroelement maize1 , retroelement-like, 10000 copies/haploid genome, pollen
ref: 827
.

prf1 , profilin homolog1 , deduced amino acid sequence from cDNA shares 76-85% identity with two other plant profilins; 3-6 member multigene family; gene specific probe
ref: 787
.

prf2 , profilin homolog2 , amino acid sequence, deduced from cDNA, shares 76-85% identity with two other plant profilins; 3-6 member gene family; gene specific probe
ref: 787
.

prf3 , Profilin homolog3 , amino acid sequence deduced from cDNA shares 76-85% identity with two other plant profilins, 3-6 member gene family; gene specific probe
ref: 787
.

prg1 , bin(s) 5.05 - 5.06 , pitted rough germless1 , small pitted rough endosperm, usually germless; seed with larger embryo will produce small striated seedlings
ref: 706
.

prh1 , bin(s) 4.04 - 4.06 , ser/thr protein phosphatase1 , PCR clone from root mRNA; expressed in E. coli as active kinase; 4-8 copies by Southern analyses; gene specific probe
ref: 762
.

prh2 , protein phosphatase homolog2 , endosperm cDNA 5C04B06 (uaz244), similar to human cell transforming protein
ref: 309
.

prl1 , protease PrlC candidate1 , endosperm cDNA 2C01C07, similar to bacterial oligopeptidase A
ref: 310
.

pro1 , bin(s) 8.04 , proline responding1 , (allele o6) crumpled opaque kernel; green-striped lethal seedling; responds to proline in culture
ref: 256
.

prp1 , pathogenesis-related protein1 , cDNA clone, single copy, deduced protein product is basic (vs. acidic), normally accumulates during germination,induced by fungal elicitors but not wounding
ref: 118
.

prp2 , bin(s) 2.04 , pathogenesis-related protein homolog2 , leaf cDNA csu133, single copy; SSR phi083 from endosperm cDNA's 5C04F07
ref: 38
.

prr1 , putidaredoxin reductase homolog1 , endosperm cDNA 5C04E05 (uaz204), similar to NADH-putidaredoxin reductase
ref: 310
.

ps1 , bin(s) 5.04 , pink scutellum1 , (aka vp7, lyc1) some alleles viviparous; endosperm and scutellum pink, seedling white with pink flush
ref: 774
.

psa1 , photosystemI1 , lacks photosystem I core complex polypeptides
ref: 31, 588
.

psa2 , photosystemI2 , lacks photosystem I core complex polypeptides
ref: 31
.

psa3 , photosystemI3 , lacks photosystem I core complex polypeptides
ref: 31
.

psa4 , photosystemI4 , lacks photosystem I core complex polypeptides
ref: 31
.

psa6 , photosystem I reaction center6 , leaf cDNA csu67, similar to barley photosystem I subunit
ref: 39
.

psb1 , bin(s) 6.01 - 6.08 , photosystem II1 , (was hcf134) lacks PSII core complex; pale seedling; mutable (Mu-induced)
ref: 31, 844
.

psb2 , bin(s) 5.05 - 5.09 , photosystemII2 , lacks photosystem II core complex polypeptides; Mu-induced
ref: 31
.

psei1